Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRSPKGSPGAVLDLQRRVDQAVSADHAELMTIAKDANTFFGAESVQDPYPLYERMRAAGSVHRIANSDFYAVCGWDAVNEAIGRPEDFSSNLTATMTYTAEGTAKPFEMDPLGGPTHVLATADDPAHAVHRKLVLRHLAAKRIRVMEQFTVQAADRLWVDGMQDG-CIEWMGAMANRLPMMVVAELIGLPDPDIAQLVKWGYAATQLLEGLVENDQLVAAGVALMELSGYIFEQFDRAAADPRDNLLGELATACASGELDTLTAQVMMVTL---FAAGGESTAALLGSAVWILATRPDIQQQVRANPELLGAFIEETLRYEPPFRGHY--RHVRNATTLDGTELPADSHLLLLWGAANRDP-AQFEAPGEFRLDRAGGKGHISFGKGAHFCVGAALARLEARIVLRLLLDRTSVIEAADVGGWLPSILVRRIERLELAVQ |
1GWI Chain:B ((85-375)) | ----------------------------------------------------------------------------------------------------------------LANPGRSMLTVDGAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVADLMGIEE---ARLPRLKVLFEKFFSTQTPPEEVVAT---LTELASIMTDTVAAKRAAPGDDLTSALIQASENG--DHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGEAEWSAVVEETLRFSTP-TSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSGNRHISFGHGPHVCPGAALSRMEAGVALPALYAR----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GWI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158763 for 2059 contacts (-77.1/contact) +
2D Compatibility (PS) -31617 + (NN) -24170 + (LL) 9944
1D Compatibility (HY) -17200 + (ID) 4800
Total energy: -226606.0 ( -110.06 by residue)
QMean score : 0.388
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