Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPGRTSIGVKIRDKVQDKVIAITGGARGIGLATAAALHNLGAKVAIGDIDEAMAKESGADLDLDMYGKLDVTDPDSFSGFLDAVERQLGPIDVLVNNAGI---MPVGRIVDEPDPVTRRILDINVYGVILGSKLAAQRMVPRGRGHVINVASLAGEIYAVGVATYCASKHAVVAFTDSARLEYRSAGVKFSMVLPSFVNTELIAGTGGIKGFKNAEPADIADAIVGLIVHPKPRVRVTKAAGSMIVAQRFMPRQVSEGLNRLLGGEHVFTDDVDMEKRRTYEARARGEE |
2EHD Chain:A ((8-214)) | -------------------VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEE---WRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPG------------------LKPEDVAQAVLFALEMP---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120348 for 1598 contacts (-75.3/contact) +
2D Compatibility (PS) -19671 + (NN) -412 + (LL) 5976
1D Compatibility (HY) -8400 + (ID) 3400
Total energy: -146255.0 ( -91.52 by residue)
QMean score : 0.513
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