Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARDARKRTSSNFPQLPPAPDDYPTFPDTSTWPVVFPELPAAPYGGPCRPPQHTSKAAAPRIPADRLPNHVAIVMDGNGRWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLMGFNRDVVRRRRDT--LKKLGVRIRWVGSRPRLWRSVINELAVAEEMTKSNDVITINYCVNYGGRTEITEATREIAREVAAGRLNPERITESTIARHLQRP--DIPDVDLFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRTRRFGSA
5HC8 Chain:A ((9-244))---------------------------------------------------------------DEVTPNHVAIIIDGHRKWAKSRGVTVQEGHQTGVNNWKHIISRASQLGIKLLTIWALSPQNFNRSKMEVDFLMRIYEDFLRSDVKELVTSQQDIQFSAIGDKSRLPEYLQDAISYAEGLSQANKGMHFILAVAYGGREDIVEAARKIAAKVEHGILRPDDIDEATFEQHLMTNITKFPSPDLLIRAAGEQRLSNFFLWQLPFTEFYFTPKLFPDFGEADLLDALASYRCRYRGFGE-


General information:
TITO was launched using:
RESULT:

Template: 5HC8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109163 for 1817 contacts (-60.1/contact) +
2D Compatibility (PS) -25517 + (NN) -10161 + (LL) 1572
1D Compatibility (HY) -19600 + (ID) 4450
Total energy: -167319.0 ( -92.09 by residue)
QMean score : 0.457

(partial model without unconserved sides chains):
PDB file : Tito_5HC8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HC8-query.scw
PDB file : Tito_Scwrl_5HC8.pdb: