Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTTPRQPLFCAHADTNGDPGRCACGQQLADVGPATPPPPWCEPGTEPIWEQLTERYGGVTICQWTRYFPAGDPVAADVWIAADDRVVDGRVLRTQPAIHYTEPPVLGIGPAAARRLAAELLNAADTLDDGRRQLDDLGEHRR
4M9L Chain:A ((93-150))
----------------------------------------------------------------------------------------------TSSSINFL-TRVSGIGPSAARKFVDE---GIKTLEDLRKNEDKLNHHQR
General information:
TITO was launched using:
RESULT:
Template:
4M9L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3506 for 260 contacts (-13.5/contact) +
2D Compatibility (PS) -5002 + (NN) -1990 + (LL) 4348
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -9100.0 ( -35.00 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_4M9L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M9L-query.scw
PDB file :
Tito_Scwrl_4M9L.pdb
: