Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIRWHIQLGNIVIPKSVNPMRIASNFDAFDFPRSMTEPGLVRIRKPSISQAGEMT
4JIR Chain:A ((248-282))
VLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELS---------------------
General information:
TITO was launched using:
RESULT:
Template:
4JIR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8195 for 161 contacts (-50.9/contact) +
2D Compatibility (PS) -3778 + (NN) -1043 + (LL) 1352
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -17064.0 ( -105.99 by residue)
QMean score : 0.164
(partial model without unconserved sides chains):
PDB file :
Tito_4JIR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JIR-query.scw
PDB file :
Tito_Scwrl_4JIR.pdb
: