Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLSIGIVGATGQVGQVMRTLLDERDF--PASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDGATGVQLVD---VPTPL-AAAGVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELLTADL |
| 2HJS Chain:A ((5-336)) | QPLNVAVVGATGSVGEALVGLLDE--RDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDFSSVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPS-VAPPVMVSVNAERLASQAAPFLLSSPCAVAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLN-------A----RPLEPRLFDRQIAFNLLAQVGAVDAEG--HSAIERRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLDATKGIEWVGEGDYPTVVGDALGQDETYVGRVRAGQADP--CQVNLWIVSDNVRKGAALNAVLLGELLIKH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HJS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116182 for 2824 contacts (-41.1/contact) +
2D Compatibility (PS) -35566 + (NN) -17074 + (LL) 244
1D Compatibility (HY) -22000 + (ID) 5350
Total energy: -195928.0 ( -69.38 by residue)
QMean score : 0.447
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