Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDYQETLYQGYGQRFSIDNMLHEVRTEHQHLVIFEN---ARMGRVMALDGVIQTTEADEFIYHEMLTHVPILAHGAARRVLIIGGGDGGMLREVAKHKSVERITMVEIDGTVVDMCKEFLPNHSQGAFDDPRLNLVIDDGMRFV-ATTEERFDVIISDSTDPIGPGEVLFSENFYQACRRCLNEGGILVTQNGTPFMQLEEVRTTA--ARTDGLFADWHFYQAAVPTYIGGAMTFAWGSTHEGLR-RLPLETLRQRFRDSGIAT--RYYNADIHLGAFALPQYVLQAIGKQDND |
| 4YUV Chain:B ((27-296)) | --------WPGQAMSLRVEKVLYDAPTKFQHLTIFESDPKGPWGTVMALDGCIQVTDYDEFVYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR-SLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETG-FASVQYALMHVPTYPCGSIGTLVCSKKAGVDVTKPLRPV----EDMPFAKDLKYYDSEMHKASFALPRFARHINN----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YUV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -149640 for 2276 contacts (-65.7/contact) +
2D Compatibility (PS) -27858 + (NN) -11056 + (LL) 1940
1D Compatibility (HY) -24400 + (ID) 5250
Total energy: -216264.0 ( -95.02 by residue)
QMean score : 0.522
|
|
|