Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSALSIRQLTKTYGNGFQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGSVSVFGHDLDKD-PAG----LKRCLGVVPQEFNFNQFEKVFDIVVTQAGYYGIPAKIAKERAERYLTQLGLWDKRNEASRMLSGGMKRRLMIARALVHQPRLLILDEPTAGVDIELRRSMWSFLTELNQEGISIILTTHYLEEAEQLCRNIAIIDHGEIVQNTSMRDLLMTLHSETFLLDLKNVQALPPTLDGYPTRLVDDHTLEVQVEKSQGINDLFAQLGAQGIEVLSLRNKTNRLEELFVSLVEKNLTRIAR
2PCJ Chain:A ((2-222))-AEILRAENIKKVIR-GYEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVDYTNEKELSLLRNRKLGFVFQFHYLIPELTALENVIVPMLKMGKPKKEAKERGEYLLSELGLGDKLSRKPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHERELA-ELTHRTLEMKDGKVVGEIT-------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144335 for 1733 contacts (-83.3/contact) +
2D Compatibility (PS) -23199 + (NN) -5616 + (LL) 7396
1D Compatibility (HY) -10000 + (ID) 3700
Total energy: -179454.0 ( -103.55 by residue)
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_2PCJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PCJ-query.scw
PDB file : Tito_Scwrl_2PCJ.pdb: