Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAVIRVDSLNKTFARKQALFNLRLEIQAGEMVALIGASGSGKSTLLRHVAGLARCDRDNGGSIDVLGRRLQASGRLSGEVRRLRADIGYIFQQFNLVNRLSVLDNVLLGFLGRMPRWRGSLGLFSAEQKRQALEALARVGLADFAGQRASTLSGGQQQRVAIARALTQKAEVILADEPIASLDPESARKVMDILADINRHDGKTVVVTLHQVDYALRYCPRAVALKGGRILFDGSSEYLSEGFLNELYGAEGDTPLLFSDRARRGAESQPELTLARA
2OLJ Chain:A ((22-248))
-LQMIDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFD---EGEIIIDGINLKAK---DTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVR-------KWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLAN-EGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFD------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165181 for 1878 contacts (-88.0/contact) +
2D Compatibility (PS) -24491 + (NN) -7097 + (LL) 2408
1D Compatibility (HY) -20800 + (ID) 4150
Total energy: -219311.0 ( -116.78 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_2OLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OLJ-query.scw
PDB file :
Tito_Scwrl_2OLJ.pdb
: