Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLLFEPLSLRQITLPNRIAVSPMCQYSAQEGLANDWH-------LVHLGSRAVGGAGLVIVEATAVLPEGRITADDLGIWSDAHVEPLHRITRFIESQGAVAGVQLAHAGRKA----------STWRPWLGK---HGSVPIGDGGWIPVAPSAIPFDPQHTTPEALSEAQI-EALVQAFVRAAERSL-AAGFKVAEVHAAHGYLLHQFLSPLSNQRRD--QYGGCFENRIRLLLQVTAAVRKAWPQELPLFVRLSATDWVEDGWNPDETVELARHLKDLGVDLIDVSSGGTAANAEIPVGPGYQTEFAERVKKEAGIASGTVGMITEPVQAEHILRTGQADLILLARELLRDPYWPLHAADELRNEQMPWPPQYLRAAHRSTPPRKSLEMQ |
4E2B Chain:A ((10-243)) | ---LLRPLKLGRYTLRNRIIMAPLTRCQATE----DGHVPRTESMLKYYEDRA--SAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQPKSDQDPLAGRLLAASAIPIKD-HRIPAYFAASGEKETYGVPEELTDDEVRNGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDA---------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97156 for 1595 contacts (-60.9/contact) +
2D Compatibility (PS) -21628 + (NN) -7531 + (LL) 9832
1D Compatibility (HY) -12800 + (ID) 3800
Total energy: -133083.0 ( -83.44 by residue)
QMean score : 0.432
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