Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVFQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLD-ADGVHAPR-HPRIRREELDITDSQRLQRLFEALP----RLDVLVNNAGISRDR--EEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGYLCA
4NBU Chain:B ((17-249))
-------------IITGAANGIGLEAARVFMKEGAKVVIADFNEAAGKEAVEANPGVVFIRVDVSDRESVHRLVENVAERFGKIDILINNAGITRDSMLSKMTVDQFQQVINVNLTGVFHCTQAVLPYMAEQGKGKIINTSSVTGTYGNVGQTNYAAAKAGVIGMTKTWAKELARKGINVNAVAPGFTETAMVAEVPEKV--IEKMKAQVPMGRLGKPEDIANAYLFLASHESDYVNGHVLHVDGGIM--
General information:
TITO was launched using:
RESULT:
Template:
4NBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128825 for 1941 contacts (-66.4/contact) +
2D Compatibility (PS) -24492 + (NN) -11155 + (LL) 1768
1D Compatibility (HY) -18400 + (ID) 3750
Total energy: -184854.0 ( -95.24 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_4NBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NBU-query.scw
PDB file :
Tito_Scwrl_4NBU.pdb
: