Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQEVRFSRLEPEQRKALLIEATLACLKRHGFQGASVRKICAEAGVSVGLINHHYDGKDALVAEAYLAVTGRVMRLLRGAIDTAPGGARPRLSAFFEASFSAELLDPQLLDAWLAFWGAVGSIEAIGRVHDHSYGEYRALLVGVLRQLAEEGGWADFDAELAAISLSALLDGLWLESGLNPATFTPRQGVQICEAWVDGLEAGAHRRFRRAMEAC
1JT6 Chain:A ((2-187))
-------------NLKDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNLYYHFKTKENLFLEILNIEESKWQEQWKKEQIKAKT-NREKFYLYNELSLTTEYYYP-LQNAIIEFYTEYYKTNSINEKMNKLENKYIDAYHVIFKEGNLNGEWSINDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKFSQIFLNGLS--------------
General information:
TITO was launched using:
RESULT:
Template:
1JT6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116352 for 1326 contacts (-87.7/contact) +
2D Compatibility (PS) -20640 + (NN) -14987 + (LL) 2388
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -154491.0 ( -116.51 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_1JT6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JT6-query.scw
PDB file :
Tito_Scwrl_1JT6.pdb
: