Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKEKYLTNFSEAKRKKATQKYNIIKPFILGEQSLSSISKSKGIALSTLYRWNKSYKEQGLKGLIYATKADKGTRKIEPKIIDEIERLALMNKRNSIATIHRKTTNYCKENNFDIPSYKQIYSVIKAMPKSVIDFSHQGEKYYQNKYDLIQIRESSRPNEIWQADHTLLDIFILDQKGNINRPWLTIIMDDYSRAIAGYFLSFDAPNAQNTALTLHQAIWNKNDTNWPVCGIPEKFYTDHGSDFTSHHMEQVAIDLKINLMFSKVGVPRGRGKIERFFQTVNQTFLEQLPGYINNNDTPSNLINFHNFEEKLRYFLIEDYNQKEHSTI-HTTPISRWNSNHFFPNMPSSLEQLDLLLLEIPKSRKVHSDGIHFQGFRYSNTNLAAYVGEYVLIRYNPNDMAEIRVFYRDEFLCTAICPEIADYSIDIKDIQHARSQRRKHLKQNIASPSTTELIKEEKNCGYSPQETTKNVKKLKRYRND |
1EX4 Chain:A ((7-154)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------SSPGIWQLDCTHL--------E---GKVILVAVHVASGYIEAEVIPA--ETGQETAYFLLKLAGR--------WP-VKTIHTDNGSNFTGATVRAACDWAGIKQEDGIP---QSQGVVESMNKELKKIIGQVRD-------------QAEHLKTAVQMA-VFIHNKKRKGGIGGYSAGERIVDI-------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48533 for 1057 contacts (-45.9/contact) +
2D Compatibility (PS) -15880 + (NN) -9091 + (LL) 21192
1D Compatibility (HY) -2000 + (ID) 1250
Total energy: -55562.0 ( -52.57 by residue)
QMean score : 0.282
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