Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSERGLLIVFSGPSGVGKGTVRQEIFSTPDHKFDYSVSMTTRPQRPGEVDGVDYFFRTREEFEALIKEGQMLEYAEYVGNYYGTPLSYVNETLDKGIDVFLEIEVQGALQVKSKVP-DGVFIFLTPPDLEELEERLVGRGTDSPEVIAQRIERAKEEIALM--REYDYAVVNDQVSLAAERVKRVIEAEHYRVDRVIGRYTNMVKETDKKLS
1EX7 Chain:A ((1-184))
----SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVIVNDDLDKAYKELKDFIFAEK----------------------
General information:
TITO was launched using:
RESULT:
Template:
1EX7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57163 for 1325 contacts (-43.1/contact) +
2D Compatibility (PS) -20605 + (NN) -16490 + (LL) 2000
1D Compatibility (HY) -10800 + (ID) 3550
Total energy: -106608.0 ( -80.46 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_1EX7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EX7-query.scw
PDB file :
Tito_Scwrl_1EX7.pdb
: