Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------MKKVRKSFVLLLTGLLAVLILSAC---GQKTQQDIVAGLDE----KAKEYTSYKAK-------------------------AKMTIETGSE------PQVYNVE-----IWHKKPSLYRVYLE-----NPKKDQNQVILRNEN-------GVFVLTPSLNKSFRFQSDWPNNSSQVY-LFESLVKDVQNDSD-----AVFTAKEKKYVFETKTNYQHNKM---LPTQEITFNKKDMSPSSVKVMDTDRKVMVKVEFSSFEFNKQFDKESFDEKKNMTLSQMDVATSAKPSDTFAVKTPLELPLGVKLLEEKDISTEDGKRIIMTY---------GGEKSFTLIQEKAQIAKASSSVTLNGEPVNLGYTIGALSDASLSWTYDGVDYLLSSKDLSKEEMVTVAKSMQGQSSK
4O7O Chain:A ((6-454))TLATKLPWSDWLSRQRWYAGRNRELATVKPGVVVALRHNLDLVLVDVTYTDGATERYQVLVGWDKAAIGVADDRTGFDALYDVAGPQFLLSLIVSSAVCGTSTGEVTFTREPDVELPFAAQPRVCDAEQSNTSVIFDRRAILKVFRRVSSGINPDIELNRVLTRAGNPHVARLLGAYQFGDALAYALGMVTEYEANAAEGWAMATASVRDLFAEGDLYAHEVGGDFAGESYRLGEAVASVHATLADSLGTAQATFPVDRMLARLSSTVAVVPELREYAPTIEQQFQKLAAEAITVQRVHGDLHLGQVLRT--PESWLLIDFEGEPGQPLDERRAPDSPLRDVAGVLRSFEYAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVYETGYETRHRPGWLPIPLRSIARLTA


General information:
TITO was launched using:
RESULT:

Template: 4O7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1425 -28364 -19.90 -84.42
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -19.90
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.100

(partial model without unconserved sides chains):
PDB file : Tito_4O7O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4O7O-query.scw
PDB file : Tito_Scwrl_4O7O.pdb: