Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTQPSGLKNLLRAAAGALPVVPRTDQLPNRTVTVEELPIDPANVAAYAAVTGLRYGNQVPLTYPFALTFPSVMS--------LVTGFDFPFAAMGAIHTENHITQYRPIAVTDAVGVRVRAENLREHRRGLLVDLVTNVSVGNDVAWHQVTTFLHQQ---------RTSLSG-----------EPKPPPQKKPKLPP----------------------------PAAVLRITPAKIRRYAAVGGDHNPIHTNPIAAKLFGFPTVIAHGMFTAAAVLANIEARFPDAV---RYSVRFAKPVLLPATAGLYVAEGDGGWDLTLRNMAKGYPHLTATVRGL------------- |
4V12 Chain:A ((7-343)) | ------DTSTLESRVGHYYQMEDTYLVGREKVREFARAVQDYHPAHWNLATAADLGHP-GLIAPLTFTSAPAMACNQRMFESVVVGYD------MYLQTEEVFEQHRPIVEGDELSIDIELTSVRRIAGRDLITVTNTFTDTAGEVVHTLHTTVVGITAEDVDPAIRPAVQGVMMHGINMLGVEETNAPYEKTVRPEGELRIAQGGATRTPTSLNFDDLKVGEELPVHTARLSRGDLVNYAGVAGDANPLHWDENIAKLAGQPDVIAHGMLTMGLGAGFVSSWSGDPGAITRYAVRLSQPAVVPAEG--TEIEYSGRIKSLDPETRTGVVIVAAKSGGRKIFGLATATIRFS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111206 for 2008 contacts (-55.4/contact) +
2D Compatibility (PS) -27803 + (NN) -875 + (LL) 856
1D Compatibility (HY) -5200 + (ID) 3300
Total energy: -147528.0 ( -73.47 by residue)
QMean score : 0.332
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