Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSTRQAGEATEASVRWRAVLLAAVAACAACGLVYELALLTLAASLNGGGIVATSLIVAGYIAALGAGALLIKPLLAHAAIAFIAVEAVLGIIGGLSAAALYAAFAFLDELDGSTLVLAVGTALIGGLVGAEVPLLMTLLQRGRVAGAADAGRTLANLNAADYLGALVGGLAWPFLLLPQLGMIRGAAVTGIVNLAAAGVVSIFLLRHVVSGRQLVTALCALAAALGLIATLLVHSHDIETTGRQQLYADPIIAYRHSAYQEIVVTRRG-DDLRLYLDGGLQFCTRDEYRYTESLVYPAVS--DGARSVLVLGGGDGLAARELLRQPGIEQIVQVELDPAVIELARTTLRDVNAGSLDNPRVHVVIDDAMSWLRGAAVPPAGFDAVIVDLRDPDTPVLGRLYSTEFYALAARALAPGGLMVVQAGSPYSTPTAFWRIISTIRSAGY-AVTPYHVHVPTF--GDWGFALARLTDIAP---TPAVPS-TAPALRFLDQQVLEAATVFSGDIRPRTLDPSTLDNPHIVEDMRHGWD |
| 2PT6 Chain:A ((61-316)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISC-GYEDKRVNVFIEDASKFLENV---TNTYDVIIVDSSDPIG-PAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKK-LFKKVEYANISIPTYPCGCIGILCCSKTDTGLTKPNKKLESKEFADLKYYNYENHSAAFKLPAFLLK---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PT6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170375 for 2075 contacts (-82.1/contact) +
2D Compatibility (PS) -27800 + (NN) -20176 + (LL) 23184
1D Compatibility (HY) -18400 + (ID) 3350
Total energy: -216917.0 ( -104.54 by residue)
QMean score : 0.500
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