Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
FIFLALLGAAVAFPVDDDDKIVGGYTCGANTVPYQVSLNSG--YHFCGGSLINSQWVVSAAHCY--KSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN
1FXY Chain:A ((1-227))
--------------------IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAAN
General information:
TITO was launched using:
RESULT:
Template:
1FXY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142452 for 1887 contacts (-75.5/contact) +
2D Compatibility (PS) -24380 + (NN) -10485 + (LL) 1536
1D Compatibility (HY) -22000 + (ID) 6200
Total energy: -203981.0 ( -108.10 by residue)
QMean score : 0.752
(partial model without unconserved sides chains):
PDB file :
Tito_1FXY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FXY-query.scw
PDB file :
Tito_Scwrl_1FXY.pdb
: