Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWVFKFLLLPVVSFALSPEETLDTQWELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVPPSRSFSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVS-ENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNAT-AKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQ-KGNKYWIIKNSWGESWGNKGYVLLARNKN---NACGITNLASFPKM |
| 1S4V Chain:A ((1-219)) | -----------------------------------------------------------------------------------------------------------------TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFTG-SCGT-ELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94243 for 1863 contacts (-50.6/contact) +
2D Compatibility (PS) -23194 + (NN) -10326 + (LL) 8352
1D Compatibility (HY) -16400 + (ID) 5400
Total energy: -141211.0 ( -75.80 by residue)
QMean score : 0.357
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