Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFQYFQRMTTVS--------------------SVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKE--PPKGAHFLAKSLDDALELIEDPELTNKVDVVWIVGGSSVYKEAMNKPGHVRLFVTRIMQEFESDAFFPEIDFEKYKLLPEYPGVPLDVQEEKGIKYKFEVYEKNN
3QG2 Chain:A ((25-229))
-EGKKNEVFNNYTFRGLGNKGVLPWKCISLDMKYFRAVTTYVNESKYEKLKYKRCKYLNKET--KKLQNVVVMGRTNWESIPKKFKPLSNRINVILSRTLKKEDFDEDV-YIINKVEDLIVLLGK----LNYYKCFILGGSVVYQEFLEKKLIKKIYFTRINSTYECDVFFPEINENEYQIISV-----SDVYTSNNTTLDFIIYKKT-
General information:
TITO was launched using:
RESULT:
Template:
3QG2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55561 for 1167 contacts (-47.6/contact) +
2D Compatibility (PS) -18779 + (NN) -8878 + (LL) 360
1D Compatibility (HY) -16400 + (ID) 2900
Total energy: -102158.0 ( -87.54 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_3QG2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QG2-query.scw
PDB file :
Tito_Scwrl_3QG2.pdb
: