Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSHHWGYSKSNGPENWHKEFPIANGDRQSPVDIDTGTAQHDPSLQPLLICYDKVASKSIVNNGHSFNVEFDDSQDFAVLKEGPLSGSYRLIQFHFHWGSSDGQGSEHTVNKKKYAAELHLVHWNT-KYGDFGKAVQHPDGLAVLGIFLKIGPASQGLQKITEALHSIKTKGKRAAFANFDPCSLLPGNLDYWTYPGSLTTPPLLECVTWIVLKEPITVSSEQMSHFRKLNFNSEGEAEELMVDNWRPAQPLKNRKIKASFK
1KEQ Chain:A ((4-240))
------------------------GTRQSPINIQWKDSVYDPQLAPLRVSYDAASCRYLWNTGYAFQVEFDDSCEDSGISGGPLGNHYRLKQFHFHWGATDEWGSEHAVDGHTYPAELHLVHWNSTKYENCKKASVGENGLAVIGVFLKLGAHHQALQKLVDVLPEVRHKDTQVAMGPFDPSCLMPACRDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSMFRTLLFSGRGEEEDVMVNNYRPLQPLRDRKLRSSFR
General information:
TITO was launched using:
RESULT:
Template:
1KEQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120892 for 1965 contacts (-61.5/contact) +
2D Compatibility (PS) -25623 + (NN) -16006 + (LL) 612
1D Compatibility (HY) -20400 + (ID) 6050
Total energy: -188359.0 ( -95.86 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_1KEQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KEQ-query.scw
PDB file :
Tito_Scwrl_1KEQ.pdb
: