Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | AHNIVLYTGAKMPILGLGTWKSPPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLALQAKLQE---QVVKREDLFIVSKLWCTYHDKDLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKD--FFPLDEDGNVIPSEKDFVDTWTAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQIECHPYLTQEKLIQYCNSKGIVVTAYSPLGSPDRPWAKPEDPSILEDPRIKAIADKYNKTTAQVLIRFPIQR----NLIVIPKSVTPERIAENFQVFDFELDKEDMNTLLSYNRD--WRACALVSCASHRDYPFHEEF |
| 3KRB Chain:A ((21-324)) | -------SMQYPPRLGFGTWQAPPEAVQTAVETALMTGYRHIDCAYVYQNEEAIGRAFGKIFKDASSG-IKREDVWITSKLWNYNHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAK--IKPLVNQIEIHPWHPNDATVKFCLDNGIGVTAYSPMGGSYA---TQ-KNVILECKTLKAIADAKGTSPHCVALAWHVKKWNTSMYSVIPKSQTPARIEANFKCTEVQLSDDDMDAINNIHLNKRIRFCDP--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173512 for 2430 contacts (-71.4/contact) +
2D Compatibility (PS) -31121 + (NN) -17566 + (LL) 2340
1D Compatibility (HY) -24400 + (ID) 6150
Total energy: -250409.0 ( -103.05 by residue)
QMean score : 0.685
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