Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLALLVLVTVALASAHHGGEHFEGEKVFRVNVEDENHINIIRELASTTQIDFWKPDSVTQIKPHSTVDFRVKAEDTVTVENVLKQNELQYKVLISNLRNVVEAQFDSRVRATGHSYEKYNKWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAG---QNKPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREIQVTELLDKLDFYVLPVLNIDGYIYTWTKS--RFWRKTRSTHTGSSCIGTDPNRNFDAGWCE-IGASRNPCDETYCGPAAESEKETKALADFIRNKL----SSIKAYLTIHSYSQMMIYPYSYAYKLGE------NNAELNALAKATVKELASLHGTKYTYGPGATTIYPAAGGSDDWAYD-QGIRYSFTFELRDT-GRYGFLLPESQIRATCEETFLAIKYVASYVLEHLY |
4IHM Chain:A ((5-313)) | ------------------------------------------------------------------------------------------------------------------YDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYSYTYTDVPSDMTQDDFNVFKTMANTM----AQTNG--YTPQQGS-DLYIADGGMD-WAYGQHKI-FAFTFEMYPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKAD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144408 for 2581 contacts (-56.0/contact) +
2D Compatibility (PS) -31267 + (NN) -15196 + (LL) 10620
1D Compatibility (HY) -15200 + (ID) 4650
Total energy: -200101.0 ( -77.53 by residue)
QMean score : 0.554
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