Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKPITPSTYVRCLNVGLIRKLSDFIDPQEGWKKLAVAIKKPSGDDRYNQFHIRRFEALLQTGKSPTSELLFDWGTTNCTVGDLVDLLIQNEFFAPASLLLPDAVPKTANTLPSKEAITVQQKQMPFCDKDRTLMTPVQNLEQSYMPPDSSSPENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS
3U4W Chain:A ((14-264))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE----AFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTT------KGRVPYPGMVNREVLDQVERGYR-------MPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS


General information:
TITO was launched using:
RESULT:

Template: 3U4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101014 for 2002 contacts (-50.5/contact) +
2D Compatibility (PS) -26281 + (NN) -5906 + (LL) 10576
1D Compatibility (HY) -17600 + (ID) 4300
Total energy: -144525.0 ( -72.19 by residue)
QMean score : 0.417

(partial model without unconserved sides chains):
PDB file : Tito_3U4W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3U4W-query.scw
PDB file : Tito_Scwrl_3U4W.pdb: