Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAASSLEQKLSRLEAKLKQENREARRRIDLNLDISPQRPRPTLQLPLANDGGSRSPSSESSPQHPTPPARPRHMLGLPSTLFTPRSMESIEIDQKLQEIMKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDL--DVVLKSH-DCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIP--ERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE-RGQIKLCDFGISGRLVDSKAKTRS-AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV-LQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKTESPRTSGVLSQPHLPFFR |
| 4BID Chain:B ((27-280)) | -----------------------------------------------------------------------------------------------------------------------------LGKGTYGIVYAGRDLSNQVRIAIKEI-----PER----SQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRL---------FTGTLQYMAPEIIDK---GPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESM--SAEAKAFILKCFEPDPDKRACANDLLVDEFLKV------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119221 for 1841 contacts (-64.8/contact) +
2D Compatibility (PS) -25230 + (NN) -21397 + (LL) 9300
1D Compatibility (HY) -15200 + (ID) 4150
Total energy: -175898.0 ( -95.54 by residue)
QMean score : 0.482
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