Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YCKESLHLCMQHLKLNDRPTWLKCCDRLIIPGPCMCKYIKDPVQWKEAYRLMASCGKTVPLNQSLKSYFKCG
M083 Chain:A ((1-106))
YCKESLHLCMQHLKLNDRPTWLKCCDRLIIPGPCMCKYIKDPVQWKEAYRLMASCGKTVPLNQSLKSYFKCG
General information:
TITO was launched using:
RESULT:
Template:
M083.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54654 for 566 contacts (-96.6/contact) +
2D Compatibility (PS) -7496 + (NN) -3948 + (LL) 0
1D Compatibility (HY) -12800 + (ID) 3600
Total energy: -82498.0 ( -145.76 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_M083.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M083-query.scw
PDB file :
Tito_Scwrl_M083.pdb
: