Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNTHASVKNLSLWYGSKQALFDINLDICKKKVTAFIGPSGCGKSTFLRCFNRMNDYVPGCKVAGKLDIDGLGDIYSRNVDVVLLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGMVKNK--QKLDEIVENSLTKVGLWEELKDRLQDSALDLSGGQQQRLCISRAIAVKPTILLMDEPCSALDPMATNAIENLIQELKLRF----TIIMVTHSMKQAKKLSDSIIFFCNGKIVESGSVQEIFENARSPLTKEYILDH |
4AYW Chain:A ((393-598)) | ----------------------DFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYD-----PASGTISLDG-HDI--RQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDE----LD--AEN--EYLVQEALDRLMDGRTVLVIAHHLSTIKN-ANMVAVLDQGKITEYGKHEE----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61329 for 1430 contacts (-42.9/contact) +
2D Compatibility (PS) -20796 + (NN) -3004 + (LL) 3608
1D Compatibility (HY) -12400 + (ID) 3750
Total energy: -97671.0 ( -68.30 by residue)
QMean score : 0.381
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