Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQGK-------PLVCVGILKGSAMFMSDLIKRI---DTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
1P17 Chain:B ((9-191))
-----EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLRGSFMFTADLCRALCDFNVPVRMEFICVSSY------SGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVYA-
General information:
TITO was launched using:
RESULT:
Template:
1P17.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119649 for 1310 contacts (-91.3/contact) +
2D Compatibility (PS) -17777 + (NN) -1080 + (LL) 20
1D Compatibility (HY) -20800 + (ID) 3600
Total energy: -162886.0 ( -124.34 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_1P17.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P17-query.scw
PDB file :
Tito_Scwrl_1P17.pdb
: