Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQFDSKAAYEQHLVTLLNKDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQRQCDIRPDDSKEQLEEKVKKLEYELYPSVIAKIVK
3DA8 Chain:A ((12-195))
PARLVVLASGTGSLLRSLLDAAVGDY--PARVVAVGVDR-ECRAAEIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALA-
General information:
TITO was launched using:
RESULT:
Template:
3DA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135018 for 1490 contacts (-90.6/contact) +
2D Compatibility (PS) -20174 + (NN) -11655 + (LL) 464
1D Compatibility (HY) -7600 + (ID) 2650
Total energy: -176633.0 ( -118.55 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_3DA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DA8-query.scw
PDB file :
Tito_Scwrl_3DA8.pdb
: