Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSETIFGKILTGEIPSFKVYEDDYVYAFLDISQVTKGHTLLIPKKASANIFETDEETMKHIGAALPKVANAIKR-AFNPDGLNIIQNNGEFADQSVFHIHFHLIPRYENDIDGFGYKWETHEDILDNDAKQQIAEQIQAQF
3O0M Chain:A ((5-118))
-MSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAARESGLHADGNNIAINDGKAAFQTVFHIHLHVVPRRNG--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3O0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60729 for 747 contacts (-81.3/contact) +
2D Compatibility (PS) -11666 + (NN) -6014 + (LL) 2476
1D Compatibility (HY) -7600 + (ID) 2000
Total energy: -85533.0 ( -114.50 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_3O0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O0M-query.scw
PDB file :
Tito_Scwrl_3O0M.pdb
: