Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFGEPLTEKTLNACK-RADAILLGAIGGPK-----WTDPNNRPEQGLLKLRKSLNLFANIRPTTVVKGASSLSPLKEERVEGTDLVIVRELTSGIYFGEPRHFNN---HEALDSLTYTREEIE-RIVHVAFKLAASR-------------RGKLTSVDKENVLA-SSKLWRKVVNEVSQL---YPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQT-TADLGGKLNTTDIFEILSQKLNH |
| 3TY4 Chain:B ((16-356)) | -------IPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKVAGYSSP-------IVALRKKMGLYANVRPVKSLDGAKG---------KPVDLVIVRENTECLYVKEERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANV-GDNFVMSEPVHGSAPDIAGRGIANPVATFRSVALML-EFMGHQDAAADIYTAVDKVLTEGKVLTPDLGGKSGTNEI---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157095 for 2666 contacts (-58.9/contact) +
2D Compatibility (PS) -33807 + (NN) -16922 + (LL) 2396
1D Compatibility (HY) -25200 + (ID) 5800
Total energy: -236428.0 ( -88.68 by residue)
QMean score : 0.442
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