Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METLQTHRVLQALIGHFTPFLESGITELIINTEQELWLYKINNTREKRGHVLFDKAFLLRFCEQLASFRGL-FFDE-EHPTLNCSIPF-TRYRVSANHFSITTNNQITLNIRVPRLKPLSLEDFTFKVSNPESLKN-LALKGHNILISGETSSGKTSLLNALLDCVNKD--ERVVSVEDSQELDLKAFSNCVGLLVGKQ-ENTRFNYEDALNMAMRLNPDRLIVGEIDTRNAA-LFLRLGNTGHKGMLSTIHANSAQNTLEALSLNLSMRYTHSLDKDLMRAYFKSAIDVIVHVNKI--NNER-QIAEVLWTKEL |
| 3JVV Chain:A ((11-284)) | --------------------AKQGASDLHLSAGLPPM-IRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVARFRVNAF--NQN--RGAGAVFRTIPSKVLTMEELGMGE----VFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHES---KKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHL-VFGTLHTTSAAKTIDRVVDVFPAE-----EKAMVRSMLSESLQSVISQTLIKK---RVAAHEIMIGTPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JVV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118227 for 1992 contacts (-59.4/contact) +
2D Compatibility (PS) -27932 + (NN) -11132 + (LL) 2228
1D Compatibility (HY) -12400 + (ID) 2650
Total energy: -170113.0 ( -85.40 by residue)
QMean score : 0.462
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