Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYKFPENFWWGSAASGPQTEGAADVDGRKPSIWDHWYKIEPGRFFN-DVGPTNTSNFYYQYKEDIALMKQTGHNSFRTSIQWSRLIPDGIGEVNPKAVDFYNRVIDEMLANDVEPFMNLYHFDMPMSMQEKGGFESREVVDAYATFAKTCFELFGDRVKHWFTFNEPIVPVEAGYLYDMHYPNVVDFKRATQVAYHTTLAHALAVKEFHALEIPEGQIGIILNLTPSYPRSQNPADLKAAHIADLIFNRSFLDPVTKGEFPTDLVEIIREH-DALPEYTEEDLAIIKNNIIDILGVNYYQPRRVKAKEYAAHPDAPFMPEHLFDNYEMPYRKMNPYRGWEIFERAIYDIAINLRDNYD-NIPFFISENGMGVEGESRYRNADGMIEDTYRIDFIKSHLKWLHKAIEEGANCHGYHLWTFMDCWSWANAYKNRYGLVEVDLDNDFKRTVKASGHWYKELAENNGFED |
| 2O9T Chain:A ((11-454)) | -TFIFPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQI-PGKVIGGDCGDVACDHFHH-FKEDVQLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIEDEGGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGHENWREAFTAAHHILMCHGIA-SNLHKEKGLTGKIGITLNMEHVDAASERPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQP-GDFLGINYYTRSIIRSTN-----DASLLQVEQV-HMEEPVTDM----GWEIHPESFYKLLTRIEKDFSKGLPILITENGAAMRDEL----VNGQIEDTGRQRYIEEHLKACHRFIEEGGQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYETQ-ERTPKQSALWFKQMMAKNGF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195360 for 3930 contacts (-49.7/contact) +
2D Compatibility (PS) -47181 + (NN) -21773 + (LL) 1304
1D Compatibility (HY) -34000 + (ID) 7700
Total energy: -304710.0 ( -77.53 by residue)
QMean score : 0.499
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