Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LNVRANRVSEQMKKELGDILNRKIKDPRLGFVTVTGVDVTGDLQEAKVFISILGTDKEKENTLLALAKAHGFIRSEIGRRIRLRKVPEMSFEIDNSIAYGNRIDELLRDLNNDQ
3OEZ Chain:B ((102-157))
-----------------------------------------------------------------------FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL----
General information:
TITO was launched using:
RESULT:
Template:
3OEZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9395 for 158 contacts (-59.5/contact) +
2D Compatibility (PS) -3768 + (NN) 3075 + (LL) 4868
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -10270.0 ( -65.00 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_3OEZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OEZ-query.scw
PDB file :
Tito_Scwrl_3OEZ.pdb
: