Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTMYAKNNTSGKDMLSLLEWNKEELTDIIKLAVAMKTN--PAHYSHILSGKILGMIFDKPSTRTRVSFEAGILQLGGQAIVMSSKELQIGRGEPIKDTAHVMSEYIDAIMIRTFSHEKVEELAYHAEIPIINGLTDLHHPCQALADLMTIYEWKDQLEG-----IKLAYIGDG-NNVCHSLLLAGAMVGIDIRLAMPKGYEVDETILAKAENLAKQSGGKIFVTEDSKLAVTDADFIYTDVWTSMGQEDEN-AKRLADFGEKYQVNAELVS-GAKPDYHFLHCLPAHREE------------------EVTTEIIDGIHSVIYQQAGNRLHAQKALLAAILEAK |
1DUV Chain:G ((6-331)) | -----------KHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTQLLADLLTMQE---HLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRE-YQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DUV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214855 for 2626 contacts (-81.8/contact) +
2D Compatibility (PS) -32704 + (NN) -17114 + (LL) 980
1D Compatibility (HY) -24400 + (ID) 6350
Total energy: -294443.0 ( -112.13 by residue)
QMean score : 0.521
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