Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITLKSRREIDEMKAAGKILADTHKELKKIIKPGITSWDLEVFTEEFLRKNGATPEQKGFEGYEYAICASINDEICHGFPRKQKLNQGDIITVDMVVNYHGALADSAWTYAVGEVPDDVKHLMDVTHKALYLGIEQAQVGARVGDIGHAIQTYVESENLAVVREFIGHGVGPTLHEKPDIPHYGTAGKGPRLKEGMVITVEPMVNMGAWKAKMDDNGWTARTVDGSLSAQYEHTFAITKDGPEILTYQGEND
3IU7 Chain:A ((50-286))
---------IEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILT------
General information:
TITO was launched using:
RESULT:
Template:
3IU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116456 for 2090 contacts (-55.7/contact) +
2D Compatibility (PS) -25534 + (NN) -10235 + (LL) 968
1D Compatibility (HY) -14800 + (ID) 4300
Total energy: -170357.0 ( -81.51 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_3IU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IU7-query.scw
PDB file :
Tito_Scwrl_3IU7.pdb
: