Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSILMNQAIQAFLLEDIGQYDLSAGTVFPRDTMGEGVFLAKETGILCGISIPPKVYELLGGNIQFEAYKKDGDWVQKGDIIAAVKAPVRTLLSGERVILNLMQRMSGIASQTNFAIKQLDDSAIRICDTRKTAPGLRAFDKYAVQTGGGFNHRNGLYDGVMLKDNHIAFSGGITSAVSTVRGKLGHMVKIEVETETAEQVKEAVQAGADIIMFDNRTPEEIKQLVKLV---PPHITTEISGNVTLENIHRYKGSGANYISLGSLTHSVRAFDISFNSKGGIKA |
2B7N Chain:A ((2-272)) | ----EIRTFLERALKEDLGHGDLFERV-LEKDFKATAFVRAKQEGVFSGEKYALELLEMT--GIECVQTIKDKERFKPKDALMEIRGDFSMLLKVERTLLNLLQHSSGIATLTSRFVEALNSHKVRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKNLPFTAKIEIECESFEEAKNAMNAGADIVMCDNLSVLETKEIAAYRDAHYPFVLLEASGNISLESINAYAKSGVDAISVGALIHQATFIDMHMKM------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B7N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156195 for 2158 contacts (-72.4/contact) +
2D Compatibility (PS) -29195 + (NN) -9180 + (LL) 284
1D Compatibility (HY) -14400 + (ID) 4700
Total energy: -213386.0 ( -98.88 by residue)
QMean score : 0.443
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