Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceVKNTIKWIAIGFAGIILLPLLIVFFIYKKAVGKKDYNPEVLENLDKASQEFVKNTSPLSDVDSRYKYMRLATKALPSAKDIEIGDVENKKIDGPAGKIPIRIYTPQEDGPFEIIVYYHGGGFVLGGLQTHDAIARKLVQTTGARVVTVDYRLAPENPFPAAVEDAYAALLWVQNHRTSLRAKSSDIIVAGDSVGGNLATVVTQIAKSKGKPNITAQILLYPATDIFSRDASVLYPSMDEFA-EGYVLTKESLDKFFKLYIANASDRKYDPLVAPIRSKDLVGLPKTFIATAEFDPLRDQGEAYAKKLKDAGVEVFAKRFEKVPHGFMTTNS--EATDETYELISEFLEEK
1JJI Chain:A ((53-310))----------------------------------------------------------------------------------VERVEDRTIKGRNGDIRVRVYQQKP--DSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAP-----TPSLLEFGEGLWILDQKIMSWFSEQYFSREEDK-FNPLASVIFA-DLENLPPALIITAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF-


General information:
TITO was launched using:
RESULT:

Template: 1JJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -164883 for 2307 contacts (-71.5/contact) +
2D Compatibility (PS) -27515 + (NN) -14888 + (LL) 6668
1D Compatibility (HY) -22800 + (ID) 5100
Total energy: -228518.0 ( -99.05 by residue)
QMean score : 0.616

(partial model without unconserved sides chains):
PDB file : Tito_1JJI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JJI-query.scw
PDB file : Tito_Scwrl_1JJI.pdb: