Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVVTNIVKIIREKKGITQNELAHSLDVSRQTIHAIEKGKYNPSLELSLKIAKFFDLPVEEIFNLEGE
2XI8 Chain:A ((2-65))
--IINNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIFQWQP-
General information:
TITO was launched using:
RESULT:
Template:
2XI8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29993 for 423 contacts (-70.9/contact) +
2D Compatibility (PS) -7020 + (NN) -4267 + (LL) 488
1D Compatibility (HY) -7600 + (ID) 1850
Total energy: -50242.0 ( -118.78 by residue)
QMean score : 0.843
(partial model without unconserved sides chains):
PDB file :
Tito_2XI8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XI8-query.scw
PDB file :
Tito_Scwrl_2XI8.pdb
: