Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQLFFRYGSMNSGKTIEILKVAHNYEEQNKTVAIFTSGIDDRDQVGFISSRIGLKREATPIFSDTNIFEIVVNIKPKPNCVLLDESQFLEKEHVFQLAKIVDELNIPVIAYGLKNDFRNELFEGSKYLLLYADKLEEMKTICWFCAKKATMVLRVDDKGKPVYTGEQIMIGGNDHYYPVCRKCHANPPIK
2ORV Chain:A ((18-191))
RGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY------------MEALPACLLRDVAQ----EALGVAVIGIDEGQFFP-DIVEFCEAMA-NAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLG-TE-----KEVEVIGGADKYHSVCRLCYFK----
General information:
TITO was launched using:
RESULT:
Template:
2ORV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68913 for 1316 contacts (-52.4/contact) +
2D Compatibility (PS) -17461 + (NN) -6893 + (LL) 1460
1D Compatibility (HY) -8000 + (ID) 1900
Total energy: -101707.0 ( -77.28 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_2ORV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ORV-query.scw
PDB file :
Tito_Scwrl_2ORV.pdb
: