Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALELLTPFTKVELEEKKRDTNRKQIGIMGGNFNPVHNAHLVVADQVRQQLCLDQVLLMPEFQPPHIDKKETIDEQHRLKMLELAIEGIDGLSIEPIEIERKGISYTYDTMKLLIEKNPDVDYYFIIGADMVEYLPKWHRIDELVKMVQFVGVQRPKYKAGTSYPVIWVDLPLMDISSSMIRQFIKSNRQPNYLLPKEVLDYIRKEGLYK
2H29 Chain:A ((1-188))
----------------------MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLYE
General information:
TITO was launched using:
RESULT:
Template:
2H29.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139456 for 1450 contacts (-96.2/contact) +
2D Compatibility (PS) -20558 + (NN) -14746 + (LL) 1948
1D Compatibility (HY) -16800 + (ID) 3850
Total energy: -193462.0 ( -133.42 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_2H29.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H29-query.scw
PDB file :
Tito_Scwrl_2H29.pdb
: