Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFINNYTLKIGNRILLENTNLDFEEGEINHLLGRNGSGKSQLAKDF--IINRG-NYFSNDIYED---TLIISSYSNLPSDVTI------NDLERTIPW----------KLSKEIYQLLNINQISKTVKLKQLSDGQKQKVKLLVLLSLDKHIIILDEITNALDKKSVDEINVFLQNYIQYYPEKIIINISHDINNIRSLKGNYFLIDNQKICKVDTLDDAISWYLGE |
| 2IT1 Chain:A ((4-224)) | IKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVTELPPKDRNVGLVFQNWALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAKMLHIDKLLN-RYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQK-ELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77883 for 1553 contacts (-50.2/contact) +
2D Compatibility (PS) -20686 + (NN) -1891 + (LL) 144
1D Compatibility (HY) -4800 + (ID) 2350
Total energy: -107466.0 ( -69.20 by residue)
QMean score : 0.414
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