Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAERMVGKQAPRFEMEAVLASKEFGKVSLEENMKNDKWTVLFFYPMDFTFVCPTEITAMSDRYDEFEDLDAEVIGVSTDTIHTHLAWINTDRKENGLGQLKYPLAADTNHEVSREYGVLIEEEGVALRGLFIINPEGELQYQTVFHNNIGRDVDETLRVLQALQ----TGGLCPANWKPGQKTL
3SBC Chain:E ((25-200))-----VQKQAPTFKKTAVV-DGVFDEVSLDK--YKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQWTDKNGTVLPCNWTPGAATI


General information:
TITO was launched using:
RESULT:

Template: 3SBC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 898 -120072 -133.71 -698.09
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain E : 0.83

3D Compatibility (PKB) : -133.71
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.611

(partial model without unconserved sides chains):
PDB file : Tito_3SBC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SBC-query.scw
PDB file : Tito_Scwrl_3SBC.pdb: