Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGQMFKVEIVTRPANFEKLKQELGKIGVTSLTFSNVHGCGLQKAHTELYRGVKIESNVYERLKIEIVVSKVPVDQVTETAKRVLKTGSPGDGKIFVYEISNTINIRTGEEGPEAL
2J9E Chain:C ((1-114))--GSMKKVEAIIRPEKLEIVKKALSDAGYVGMTVSEVKGRGVQGGIVERYRGREYIVDLIPKVKIELVVKEEDVDNVIDIICENARTGNPGDGKIFVIPVERVVRVRTKEEGKEAL


General information:
TITO was launched using:
RESULT:

Template: 2J9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 441 -38457 -87.20 -337.34
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain C : 0.81

3D Compatibility (PKB) : -87.20
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_2J9E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J9E-query.scw
PDB file : Tito_Scwrl_2J9E.pdb: