Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASEFSRAELAAAFEKFEKTVARAAATRDWDCWVQHYTPDVEYIEHAA----GIMRGRQRVRAWIQETMTTFPGSHMVAFPSLWSVIDESTGRIICELDNPMLDPGDGSVISATNISIITYAGNGQWCRQEDIYNPLRFLRAAMKWCRKAQELGTLDEDAARWMRRHGGP
3FGY Chain:A ((3-133))
------STQENVQIVKDFFAA----MGRGDKKGLLAVSAEDIEWIIPGEWPLAGTHRGHAALAALLQKASEMVEI---SYPEPPEFVAQGE--RVLVVGFATGRVKSTNRTFEDDWVFAITV-RKSKVTSIREYIDTLALARATNFN------------------------
General information:
TITO was launched using:
RESULT:
Template:
3FGY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41981 for 874 contacts (-48.0/contact) +
2D Compatibility (PS) -14186 + (NN) -7932 + (LL) 2644
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -63605.0 ( -72.77 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_3FGY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FGY-query.scw
PDB file :
Tito_Scwrl_3FGY.pdb
: