Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVVPIRIVGDPVLHTATTPVTVAADGSLPADLAQLIATMYDTMDAANGVGLAANQIGCSLRLFVYDCAADRAMTARRRGVVINPVLETSEIPETMPDPDTDDEGCLSVPGESFPTGRAKWARVTGLDADGSPVSIEGTGLFARMLQHETGHLDGFLYLDRLIGRYARNAKRAVKSHGWGVPGLSWLPGEDPDPFGH
4WXK Chain:B ((3-147))
--ALNVLIYPDDHLKVVCEPVTEVNDA-----IRKIVDDMFDTMYQEKGIGLAAPQVDILQRIITIDVEGDK----QNQFVLINPEILASEGETGI------EEGCLSIPGFRALVPRKEKVTVRALDRDGKEFTLDADGLLAICIQHEIDHLNGILFVDYL-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4WXK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77996 for 1146 contacts (-68.1/contact) +
2D Compatibility (PS) -15274 + (NN) -2970 + (LL) 1168
1D Compatibility (HY) -13200 + (ID) 2550
Total energy: -110822.0 ( -96.70 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_4WXK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WXK-query.scw
PDB file :
Tito_Scwrl_4WXK.pdb
: