Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRYDSLLQALGNTPLVGLQRLS--PRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNP-SWVMLYQYGNPANTDSHYCGTGPELLADLP-EITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPR-------YGEGVYALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIALVVADAGWKYLSTGAYAGSLDDAETALEGQLWA |
| 4JBN Chain:A ((14-319)) | ---YHNILETIGGTPLVELHGVTEHPRIKKG-----TRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPGMEIIESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHY-TANEIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKGPHGIQGIGAGFIPDIYKKEFVDEIIPIKTQDAWKMARAVVKYDGIMCGMSSGAAILA--GLKEAEKPENEGKTIVIIVPSCGERYLSTDLY----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JBN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -127582 for 2673 contacts (-47.7/contact) +
2D Compatibility (PS) -32038 + (NN) -8303 + (LL) 1380
1D Compatibility (HY) -23200 + (ID) 5300
Total energy: -195043.0 ( -72.97 by residue)
QMean score : 0.475
|
|
|