Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGESGAAAAPSITLNDEHTMPVLGLGV---AELSDDETERAVSAALEIGCRLIDTAYAYGNEAAVGRAI----AASGVAREELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPAP-----------PVGKY----VD---AWGGMIQSRGEGHARSIGVSNFTAENIENLID---LTFVTPAVNQIELHPLLNQDELRKANAQHTVVTQSYCPLALGR-----------LLDNPTVTSIASEYVKTPAQVLLRWNLQLGNAVVVRSARPERIASNFDVFDFELAAEHMDALGGLNDGTRVREDPLTYAGT |
| 4L1W Chain:B ((10-306)) | ------------VKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKY-KPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVR----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141178 for 2137 contacts (-66.1/contact) +
2D Compatibility (PS) -27651 + (NN) -8676 + (LL) 1116
1D Compatibility (HY) -22800 + (ID) 5400
Total energy: -204589.0 ( -95.74 by residue)
QMean score : 0.447
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