Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSTIHPLPSFGLGTFRLTGQVVVDSVRSALELGYRAIDTAQIYGNEADIGRAIAES----GVPRSELFLTTKVWVDNYAREKLLASLRESLEKLRTDRLDLVLIHWPA---PG--------------NGVELGEYMAALAEAKSLGLTRRIGVSNFNIELTRQAIAAVGAG-EISTNQIELSPYLQNRALTAYLEEQGIAVTSYMTLA-----YGK-----VLKDPTLAGIAARHRATVAQVALAWAMQLGYAVIPSSTRRENLASNLLARDLRLDAEDMARIAGLERNGREVSPQGLAPAWD |
4JIR Chain:A ((13-297)) | -------MPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWR------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -144161 for 2108 contacts (-68.4/contact) +
2D Compatibility (PS) -27710 + (NN) -11375 + (LL) 792
1D Compatibility (HY) -21200 + (ID) 4800
Total energy: -208454.0 ( -98.89 by residue)
QMean score : 0.587
|
|
|