Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLEKVNKWYGAYHALADVDEQVGRGEVVVVCGPSGSGKSTLIRTLNRLEPIQGGRILIDGQDIHAPGLDLNRFRSHIGFVFQQFNLFPHLNVLDNCTLASLRLRGLKPAEARRQAMA---LLE-RVGLADKAAAFPARLSGGQQQRVAIARALAMEPPLMLFDEPTSALDPEMVGEVLLVMRDLARDGMTMVVVTHEMGFAHDVADRVLFMDAGRVLERASPDDFFNRPQHPRARKFLADIRTPFAQPL
2FF7 Chain:A ((25-235))
----------------LDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALA--DPNWLRRQVGVVLQD-NVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICK-GRTVIIIAHRLSTVKN-ADRIIVMEKGKIVEQGKHKELLSEPE-------------------
General information:
TITO was launched using:
RESULT:
Template:
2FF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117252 for 1544 contacts (-75.9/contact) +
2D Compatibility (PS) -21797 + (NN) -6496 + (LL) 3120
1D Compatibility (HY) -14400 + (ID) 3650
Total energy: -160475.0 ( -103.93 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2FF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FF7-query.scw
PDB file :
Tito_Scwrl_2FF7.pdb
: